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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs75281991 chr2:99781339 G/GGGT TSGA10 chr2:99613724-99771427:- 0.57 5.59 8.51E-7 Box Plot
ACC rs7528505 chr1:213051521 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7531073 chr1:213051671 T/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7534973 chr1:213053550 A/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7536716 chr1:213058852 T/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7538797 chr1:213051582 G/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7544562 chr1:213058911 G/T LQK1 chr1:213029947-213031480:- 0.84 9.74 2.53E-13 Box Plot
ACC rs7544567 chr1:213028837 G/C LQK1 chr1:213029947-213031480:- 0.83 9.23 1.56E-12 Box Plot
ACC rs7544645 chr1:213028899 G/A LQK1 chr1:213029947-213031480:- 0.83 9.23 1.56E-12 Box Plot
ACC rs7550087 chr1:63958446 A/C ITGB3BP chr1:63906441-64059392:- 0.6 6.37 4.99E-8 Box Plot
ACC rs7558954 chr2:61384906 T/C C2orf74 chr2:61372203-61391964:+ 0.56 5.76 4.57E-7 Box Plot
ACC rs75610088 chr5:96289043 G/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs75671002 chr20:44373543 G/A WFDC3 chr20:44376583-44420571:- 0.93 6.65 1.82E-8 Box Plot
ACC rs75741381 chr7:100809458 C/G AP1S1 chr7:100797678-100804877:+ 0.72 5.06 5.57E-6 Box Plot
ACC rs7582011 chr2:88452740 A/T THNSL2 chr2:88469814-88486155:+ 0.82 6.48 3.37E-8 Box Plot